Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016
Identifieur interne : 000E43 ( Main/Exploration ); précédent : 000E42; suivant : 000E44Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016
Auteurs : Mohamed Ali [Égypte] ; Rabeh El-Shesheny [Égypte] ; Ahmed Kandeil [Égypte] ; Mahmoud Shehata [Égypte] ; Basma Elsokary [Égypte] ; Mokhtar Gomaa [Égypte] ; Naglaa Hassan [Égypte] ; Ahmed El Sayed [Égypte] ; Ahmed El-Taweel [Égypte] ; Heba Sobhy [Égypte] ; Fasina Folorunso Oludayo [Afrique du Sud] ; Gwenaelle Dauphin [Italie] ; Ihab El Masry [Égypte] ; Abebe Wossene Wolde [Égypte] ; Peter Daszak [États-Unis] ; Maureen Miller [États-Unis] ; Sophie Vondobschuetz [Italie] ; Emma Gardner [Italie] ; Subhash Morzaria [Italie] ; Juan Lubroth [Italie] ; Yilma Jobre Makonnen [Égypte]Source :
- Eurosurveillance [ 1025-496X ] ; 2017.
Descripteurs français
- KwdFr :
- ARN viral (analyse), Analyse de séquence d'ARN, Animaux, Anticorps antiviraux (sang), Anticorps neutralisants (sang), Bovins (sang), Capra (sang), Chameaux (virologie), Coronavirus (génétique), Coronavirus (isolement et purification), Coronavirus du syndrome respiratoire du Moyen-Orient (), Coronavirus du syndrome respiratoire du Moyen-Orient (génétique), Données de séquences moléculaires, Flambées de maladies (médecine vétérinaire), Génotype, Immunoglobuline G (sang), Infections à coronavirus (diagnostic), Infections à coronavirus (médecine vétérinaire), Infections à coronavirus (virologie), Infections à coronavirus (épidémiologie), Ovis (sang), Prévalence, RT-PCR, Réservoirs d'agents pathogènes (virologie), Séquence nucléotidique, Zoonoses (diagnostic), Zoonoses (virologie), Zoonoses (épidémiologie), Égypte (épidémiologie), Études séroépidémiologiques, Études transversales.
- MESH :
- analyse : ARN viral.
- diagnostic : Infections à coronavirus, Zoonoses.
- génétique : Coronavirus, Coronavirus du syndrome respiratoire du Moyen-Orient.
- isolement et purification : Coronavirus.
- médecine vétérinaire : Flambées de maladies, Infections à coronavirus.
- sang : Anticorps antiviraux, Anticorps neutralisants, Bovins, Capra, Immunoglobuline G, Ovis.
- virologie : Chameaux, Infections à coronavirus, Réservoirs d'agents pathogènes, Zoonoses.
- épidémiologie : Infections à coronavirus, Zoonoses, Égypte.
- Analyse de séquence d'ARN, Animaux, Coronavirus du syndrome respiratoire du Moyen-Orient, Données de séquences moléculaires, Génotype, Prévalence, RT-PCR, Séquence nucléotidique, Études séroépidémiologiques, Études transversales.
English descriptors
- KwdEn :
- Animals, Antibodies, Neutralizing (blood), Antibodies, Viral (blood), Base Sequence, Camelus (virology), Cattle (blood), Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (diagnosis), Coronavirus Infections (epidemiology), Coronavirus Infections (veterinary), Coronavirus Infections (virology), Cross-Sectional Studies, Disease Outbreaks (veterinary), Disease Reservoirs (virology), Egypt (epidemiology), Genotype, Goats (blood), Immunoglobulin G (blood), Middle East Respiratory Syndrome Coronavirus (classification), Middle East Respiratory Syndrome Coronavirus (genetics), Molecular Sequence Data, Prevalence, RNA, Viral (analysis), Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, RNA, Seroepidemiologic Studies, Sheep (blood), Zoonoses (diagnosis), Zoonoses (epidemiology), Zoonoses (virology).
- MESH :
- chemical , analysis : RNA, Viral.
- chemical , blood : Antibodies, Neutralizing, Antibodies, Viral, Immunoglobulin G.
- blood : Cattle, Goats, Sheep.
- classification : Middle East Respiratory Syndrome Coronavirus.
- diagnosis : Coronavirus Infections, Zoonoses.
- epidemiology : Coronavirus Infections, Egypt, Zoonoses.
- genetics : Coronavirus, Middle East Respiratory Syndrome Coronavirus.
- isolation & purification : Coronavirus.
- veterinary : Coronavirus Infections, Disease Outbreaks.
- virology : Camelus, Coronavirus Infections, Disease Reservoirs, Zoonoses.
- Animals, Base Sequence, Cross-Sectional Studies, Genotype, Molecular Sequence Data, Prevalence, Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, RNA, Seroepidemiologic Studies.
Abstract
A cross-sectional study was conducted in Egypt to determine the prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) in imported and resident camels and bats, as well as to assess possible transmission of the virus to domestic ruminants and equines. A total of 1,031 sera, 1,078 nasal swabs, 13 rectal swabs, and 38 milk samples were collected from 1,078 camels in different types of sites. In addition, 145 domestic animals and 109 bats were sampled. Overall, of 1,031 serologically-tested camels, 871 (84.5%) had MERS-CoV neutralising antibodies. Seroprevalence was significantly higher in imported (614/692; 88.7%) than resident camels (257/339; 5.8%) (p < 0.05). Camels from Sudan (543/594; 91.4%) had a higher seroprevalence than those from East Africa (71/98; 72.4%) (p < 0.05). Sampling site and age were also associated with MERS-CoV seroprevalence (p < 0.05). All tested samples from domestic animals and bats were negative for MERS-CoV antibodies except one sheep sample which showed a 1:640 titre. Of 1,078 camels, 41 (3.8%) were positive for MERS-CoV genetic material. Sequences obtained were not found to cluster with clade A or B MERS-CoV sequences and were genetically diverse. The presence of neutralising antibodies in one sheep apparently in contact with seropositive camels calls for further studies on domestic animals in contact with camels.
Url:
DOI: 10.2807/1560-7917.ES.2017.22.11.30487
PubMed: 28333616
PubMed Central: 5356426
Affiliations:
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Le document en format XML
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Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Lubroth, Juan" sort="Lubroth, Juan" uniqKey="Lubroth J" first="Juan" last="Lubroth">Juan Lubroth</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Makonnen, Yilma Jobre" sort="Makonnen, Yilma Jobre" uniqKey="Makonnen Y" first="Yilma Jobre" last="Makonnen">Yilma Jobre Makonnen</name><affiliation wicri:level="1"><nlm:aff id="aff3">Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD), Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:regionArea><wicri:noRegion>Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">28333616</idno><idno type="pmc">5356426</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5356426</idno><idno type="RBID">PMC:5356426</idno><idno type="doi">10.2807/1560-7917.ES.2017.22.11.30487</idno><date when="2017">2017</date><idno type="wicri:Area/Pmc/Corpus">000C60</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000C60</idno><idno type="wicri:Area/Pmc/Curation">000C60</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000C60</idno><idno type="wicri:Area/Pmc/Checkpoint">000901</idno><idno 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type="wicri:Area/Main/Exploration">000E43</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016</title><author><name sortKey="Ali, Mohamed" sort="Ali, Mohamed" uniqKey="Ali M" first="Mohamed" last="Ali">Mohamed Ali</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="El Shesheny, Rabeh" sort="El Shesheny, Rabeh" uniqKey="El Shesheny R" first="Rabeh" last="El-Shesheny">Rabeh El-Shesheny</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Kandeil, Ahmed" sort="Kandeil, Ahmed" uniqKey="Kandeil A" first="Ahmed" last="Kandeil">Ahmed Kandeil</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Shehata, Mahmoud" sort="Shehata, Mahmoud" uniqKey="Shehata M" first="Mahmoud" last="Shehata">Mahmoud Shehata</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Elsokary, Basma" sort="Elsokary, Basma" uniqKey="Elsokary B" first="Basma" last="Elsokary">Basma Elsokary</name><affiliation wicri:level="1"><nlm:aff id="aff2">General Organizations of Veterinary Services, Ministry of Agriculture and Land reclamation (MoALR), Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>General Organizations of Veterinary Services, Ministry of Agriculture and Land reclamation (MoALR), Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Gomaa, Mokhtar" sort="Gomaa, Mokhtar" uniqKey="Gomaa M" first="Mokhtar" last="Gomaa">Mokhtar Gomaa</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Hassan, Naglaa" sort="Hassan, Naglaa" uniqKey="Hassan N" first="Naglaa" last="Hassan">Naglaa Hassan</name><affiliation wicri:level="1"><nlm:aff id="aff2">General Organizations of Veterinary Services, Ministry of Agriculture and Land reclamation (MoALR), Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>General Organizations of Veterinary Services, Ministry of Agriculture and Land reclamation (MoALR), Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="El Sayed, Ahmed" sort="El Sayed, Ahmed" uniqKey="El Sayed A" first="Ahmed" last="El Sayed">Ahmed El Sayed</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="El Taweel, Ahmed" sort="El Taweel, Ahmed" uniqKey="El Taweel A" first="Ahmed" last="El-Taweel">Ahmed El-Taweel</name><affiliation wicri:level="1"><nlm:aff id="aff1">National Research Center, Division of Environmental Research, Giza, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>National Research Center, Division of Environmental Research, Giza</wicri:regionArea><wicri:noRegion>Giza</wicri:noRegion></affiliation></author><author><name sortKey="Sobhy, Heba" sort="Sobhy, Heba" uniqKey="Sobhy H" first="Heba" last="Sobhy">Heba Sobhy</name><affiliation wicri:level="1"><nlm:aff id="aff3">Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD), Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:regionArea><wicri:noRegion>Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:noRegion></affiliation></author><author><name sortKey="Oludayo, Fasina Folorunso" sort="Oludayo, Fasina Folorunso" uniqKey="Oludayo F" first="Fasina Folorunso" last="Oludayo">Fasina Folorunso Oludayo</name><affiliation wicri:level="1"><nlm:aff id="aff6">Department of Veterinary Tropical Diseases, Faculty of Veterinary Science, University of Pretoria, South Africa</nlm:aff><country xml:lang="fr">Afrique du Sud</country><wicri:regionArea>Department of Veterinary Tropical Diseases, Faculty of Veterinary Science, University of Pretoria</wicri:regionArea><wicri:noRegion>University of Pretoria</wicri:noRegion></affiliation></author><author><name sortKey="Dauphin, Gwenaelle" sort="Dauphin, Gwenaelle" uniqKey="Dauphin G" first="Gwenaelle" last="Dauphin">Gwenaelle Dauphin</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="El Masry, Ihab" sort="El Masry, Ihab" uniqKey="El Masry I" first="Ihab" last="El Masry">Ihab El Masry</name><affiliation wicri:level="1"><nlm:aff id="aff3">Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD), Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:regionArea><wicri:noRegion>Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:noRegion></affiliation></author><author><name sortKey="Wolde, Abebe Wossene" sort="Wolde, Abebe Wossene" uniqKey="Wolde A" first="Abebe Wossene" last="Wolde">Abebe Wossene Wolde</name><affiliation wicri:level="1"><nlm:aff id="aff3">Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD), Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:regionArea><wicri:noRegion>Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:noRegion></affiliation></author><author><name sortKey="Daszak, Peter" sort="Daszak, Peter" uniqKey="Daszak P" first="Peter" last="Daszak">Peter Daszak</name><affiliation wicri:level="2"><nlm:aff id="aff4">EcoHealth Alliance, New York, New York, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>EcoHealth Alliance, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author><author><name sortKey="Miller, Maureen" sort="Miller, Maureen" uniqKey="Miller M" first="Maureen" last="Miller">Maureen Miller</name><affiliation wicri:level="2"><nlm:aff id="aff4">EcoHealth Alliance, New York, New York, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>EcoHealth Alliance, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author><author><name sortKey="Vondobschuetz, Sophie" sort="Vondobschuetz, Sophie" uniqKey="Vondobschuetz S" first="Sophie" last="Vondobschuetz">Sophie Vondobschuetz</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Gardner, Emma" sort="Gardner, Emma" uniqKey="Gardner E" first="Emma" last="Gardner">Emma Gardner</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Morzaria, Subhash" sort="Morzaria, Subhash" uniqKey="Morzaria S" first="Subhash" last="Morzaria">Subhash Morzaria</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Lubroth, Juan" sort="Lubroth, Juan" uniqKey="Lubroth J" first="Juan" last="Lubroth">Juan Lubroth</name><affiliation wicri:level="3"><nlm:aff id="aff5">Food and Agriculture Organization of the United Nations, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Makonnen, Yilma Jobre" sort="Makonnen, Yilma Jobre" uniqKey="Makonnen Y" first="Yilma Jobre" last="Makonnen">Yilma Jobre Makonnen</name><affiliation wicri:level="1"><nlm:aff id="aff3">Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD), Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:regionArea><wicri:noRegion>Emergency Center for Transboundary Animal Diseases (ECTAD)</wicri:noRegion></affiliation></author></analytic><series><title level="j">Eurosurveillance</title><idno type="ISSN">1025-496X</idno><idno type="eISSN">1560-7917</idno><imprint><date when="2017">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Antibodies, Neutralizing (blood)</term><term>Antibodies, Viral (blood)</term><term>Base Sequence</term><term>Camelus (virology)</term><term>Cattle (blood)</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Coronavirus Infections (diagnosis)</term><term>Coronavirus Infections (epidemiology)</term><term>Coronavirus Infections (veterinary)</term><term>Coronavirus Infections (virology)</term><term>Cross-Sectional Studies</term><term>Disease Outbreaks (veterinary)</term><term>Disease Reservoirs (virology)</term><term>Egypt (epidemiology)</term><term>Genotype</term><term>Goats (blood)</term><term>Immunoglobulin G (blood)</term><term>Middle East Respiratory Syndrome Coronavirus (classification)</term><term>Middle East Respiratory Syndrome Coronavirus (genetics)</term><term>Molecular Sequence Data</term><term>Prevalence</term><term>RNA, Viral (analysis)</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Sequence Analysis, RNA</term><term>Seroepidemiologic Studies</term><term>Sheep (blood)</term><term>Zoonoses (diagnosis)</term><term>Zoonoses (epidemiology)</term><term>Zoonoses (virology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (analyse)</term><term>Analyse de séquence d'ARN</term><term>Animaux</term><term>Anticorps antiviraux (sang)</term><term>Anticorps neutralisants (sang)</term><term>Bovins (sang)</term><term>Capra (sang)</term><term>Chameaux (virologie)</term><term>Coronavirus (génétique)</term><term>Coronavirus (isolement et purification)</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient ()</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient (génétique)</term><term>Données de séquences moléculaires</term><term>Flambées de maladies (médecine vétérinaire)</term><term>Génotype</term><term>Immunoglobuline G (sang)</term><term>Infections à coronavirus (diagnostic)</term><term>Infections à coronavirus (médecine vétérinaire)</term><term>Infections à coronavirus (virologie)</term><term>Infections à coronavirus (épidémiologie)</term><term>Ovis (sang)</term><term>Prévalence</term><term>RT-PCR</term><term>Réservoirs d'agents pathogènes (virologie)</term><term>Séquence nucléotidique</term><term>Zoonoses (diagnostic)</term><term>Zoonoses (virologie)</term><term>Zoonoses (épidémiologie)</term><term>Égypte (épidémiologie)</term><term>Études séroépidémiologiques</term><term>Études transversales</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" type="chemical" qualifier="blood" xml:lang="en"><term>Antibodies, Neutralizing</term><term>Antibodies, Viral</term><term>Immunoglobulin G</term></keywords><keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>ARN viral</term></keywords><keywords scheme="MESH" qualifier="blood" xml:lang="en"><term>Cattle</term><term>Goats</term><term>Sheep</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term></keywords><keywords scheme="MESH" qualifier="diagnosis" xml:lang="en"><term>Coronavirus Infections</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="diagnostic" xml:lang="fr"><term>Infections à coronavirus</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Coronavirus Infections</term><term>Egypt</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term><term>Middle East Respiratory Syndrome Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Flambées de maladies</term><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="sang" xml:lang="fr"><term>Anticorps antiviraux</term><term>Anticorps neutralisants</term><term>Bovins</term><term>Capra</term><term>Immunoglobuline G</term><term>Ovis</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Coronavirus Infections</term><term>Disease Outbreaks</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chameaux</term><term>Infections à coronavirus</term><term>Réservoirs d'agents pathogènes</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Camelus</term><term>Coronavirus Infections</term><term>Disease Reservoirs</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Infections à coronavirus</term><term>Zoonoses</term><term>Égypte</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Base Sequence</term><term>Cross-Sectional Studies</term><term>Genotype</term><term>Molecular Sequence Data</term><term>Prevalence</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Sequence Analysis, RNA</term><term>Seroepidemiologic Studies</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ARN</term><term>Animaux</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term><term>Données de séquences moléculaires</term><term>Génotype</term><term>Prévalence</term><term>RT-PCR</term><term>Séquence nucléotidique</term><term>Études séroépidémiologiques</term><term>Études transversales</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>A cross-sectional study was conducted in Egypt to determine the prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) in imported and resident camels and bats, as well as to assess possible transmission of the virus to domestic ruminants and equines. A total of 1,031 sera, 1,078 nasal swabs, 13 rectal swabs, and 38 milk samples were collected from 1,078 camels in different types of sites. In addition, 145 domestic animals and 109 bats were sampled. Overall, of 1,031 serologically-tested camels, 871 (84.5%) had MERS-CoV neutralising antibodies. Seroprevalence was significantly higher in imported (614/692; 88.7%) than resident camels (257/339; 5.8%) (p < 0.05). Camels from Sudan (543/594; 91.4%) had a higher seroprevalence than those from East Africa (71/98; 72.4%) (p < 0.05). Sampling site and age were also associated with MERS-CoV seroprevalence (p < 0.05). All tested samples from domestic animals and bats were negative for MERS-CoV antibodies except one sheep sample which showed a 1:640 titre. Of 1,078 camels, 41 (3.8%) were positive for MERS-CoV genetic material. Sequences obtained were not found to cluster with clade A or B MERS-CoV sequences and were genetically diverse. 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Binger</name></author><author><name sortKey="Meyer, B" uniqKey="Meyer B">B Meyer</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Corman, Vm" uniqKey="Corman V">VM Corman</name></author><author><name sortKey="Eckerle, I" uniqKey="Eckerle I">I Eckerle</name></author><author><name sortKey="Bleicker, T" uniqKey="Bleicker T">T Bleicker</name></author><author><name sortKey="Zaki, A" uniqKey="Zaki A">A Zaki</name></author><author><name sortKey="Landt, O" uniqKey="Landt O">O Landt</name></author><author><name sortKey="Eschbach Bludau, M" uniqKey="Eschbach Bludau M">M Eschbach-Bludau</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Stecher, G" uniqKey="Stecher G">G Stecher</name></author><author><name sortKey="Peterson, D" uniqKey="Peterson D">D Peterson</name></author><author><name sortKey="Filipski, A" uniqKey="Filipski A">A Filipski</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Adney, Dr" uniqKey="Adney D">DR Adney</name></author><author><name sortKey="Van Doremalen, N" uniqKey="Van Doremalen N">N van Doremalen</name></author><author><name sortKey="Brown, Vr" uniqKey="Brown V">VR Brown</name></author><author><name sortKey="Bushmaker, T" uniqKey="Bushmaker T">T Bushmaker</name></author><author><name sortKey="Scott, D" uniqKey="Scott D">D Scott</name></author><author><name sortKey="De Wit, E" uniqKey="De Wit E">E de Wit</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hemida, Mg" uniqKey="Hemida M">MG Hemida</name></author><author><name sortKey="Elmoslemany, A" uniqKey="Elmoslemany A">A Elmoslemany</name></author><author><name sortKey="Al Hizab, F" uniqKey="Al Hizab F">F Al-Hizab</name></author><author><name sortKey="Alnaeem, A" uniqKey="Alnaeem A">A Alnaeem</name></author><author><name sortKey="Almathen, F" uniqKey="Almathen F">F Almathen</name></author><author><name sortKey="Faye, B" uniqKey="Faye B">B Faye</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kandeil, A" uniqKey="Kandeil A">A Kandeil</name></author><author><name sortKey="Shehata, Mm" uniqKey="Shehata M">MM Shehata</name></author><author><name sortKey="El Shesheny, R" uniqKey="El Shesheny R">R El Shesheny</name></author><author><name sortKey="Gomaa, Mr" uniqKey="Gomaa M">MR Gomaa</name></author><author><name sortKey="Ali, Ma" uniqKey="Ali M">MA Ali</name></author><author><name sortKey="Kayali, G" uniqKey="Kayali G">G Kayali</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Doremalen, N" uniqKey="Van Doremalen N">N van Doremalen</name></author><author><name sortKey="Miazgowicz, Kl" uniqKey="Miazgowicz K">KL Miazgowicz</name></author><author><name sortKey="Milne Price, S" uniqKey="Milne Price S">S Milne-Price</name></author><author><name sortKey="Bushmaker, T" uniqKey="Bushmaker T">T Bushmaker</name></author><author><name sortKey="Robertson, S" uniqKey="Robertson S">S Robertson</name></author><author><name sortKey="Scott, D" uniqKey="Scott D">D Scott</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sharif Yakan, A" uniqKey="Sharif Yakan A">A Sharif-Yakan</name></author><author><name sortKey="Kanj, Ss" uniqKey="Kanj S">SS Kanj</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Afrique du Sud</li><li>Italie</li><li>Égypte</li><li>États-Unis</li></country><region><li>Latium</li><li>État de New York</li></region><settlement><li>Rome</li></settlement></list><tree><country name="Égypte"><noRegion><name sortKey="Ali, Mohamed" sort="Ali, Mohamed" uniqKey="Ali M" first="Mohamed" last="Ali">Mohamed Ali</name></noRegion><name sortKey="El Masry, Ihab" sort="El Masry, Ihab" uniqKey="El Masry I" first="Ihab" last="El Masry">Ihab El Masry</name><name sortKey="El Sayed, Ahmed" sort="El Sayed, Ahmed" uniqKey="El Sayed A" first="Ahmed" last="El Sayed">Ahmed El Sayed</name><name sortKey="El Shesheny, Rabeh" sort="El Shesheny, Rabeh" uniqKey="El Shesheny R" first="Rabeh" last="El-Shesheny">Rabeh El-Shesheny</name><name sortKey="El Taweel, Ahmed" sort="El Taweel, Ahmed" uniqKey="El Taweel A" first="Ahmed" last="El-Taweel">Ahmed El-Taweel</name><name sortKey="Elsokary, Basma" sort="Elsokary, Basma" uniqKey="Elsokary B" first="Basma" last="Elsokary">Basma Elsokary</name><name sortKey="Gomaa, Mokhtar" sort="Gomaa, Mokhtar" uniqKey="Gomaa M" first="Mokhtar" last="Gomaa">Mokhtar Gomaa</name><name sortKey="Hassan, Naglaa" sort="Hassan, Naglaa" uniqKey="Hassan N" first="Naglaa" last="Hassan">Naglaa Hassan</name><name sortKey="Kandeil, Ahmed" sort="Kandeil, Ahmed" uniqKey="Kandeil A" first="Ahmed" last="Kandeil">Ahmed Kandeil</name><name sortKey="Makonnen, Yilma Jobre" sort="Makonnen, Yilma Jobre" uniqKey="Makonnen Y" first="Yilma Jobre" last="Makonnen">Yilma Jobre Makonnen</name><name sortKey="Shehata, Mahmoud" sort="Shehata, Mahmoud" uniqKey="Shehata M" first="Mahmoud" last="Shehata">Mahmoud Shehata</name><name sortKey="Sobhy, Heba" sort="Sobhy, Heba" uniqKey="Sobhy H" first="Heba" last="Sobhy">Heba Sobhy</name><name sortKey="Wolde, Abebe Wossene" sort="Wolde, Abebe Wossene" uniqKey="Wolde A" first="Abebe Wossene" last="Wolde">Abebe Wossene Wolde</name></country><country name="Afrique du Sud"><noRegion><name sortKey="Oludayo, Fasina Folorunso" sort="Oludayo, Fasina Folorunso" uniqKey="Oludayo F" first="Fasina Folorunso" last="Oludayo">Fasina Folorunso Oludayo</name></noRegion></country><country name="Italie"><region name="Latium"><name sortKey="Dauphin, Gwenaelle" sort="Dauphin, Gwenaelle" uniqKey="Dauphin G" first="Gwenaelle" last="Dauphin">Gwenaelle Dauphin</name></region><name sortKey="Gardner, Emma" sort="Gardner, Emma" uniqKey="Gardner E" first="Emma" last="Gardner">Emma Gardner</name><name sortKey="Lubroth, Juan" sort="Lubroth, Juan" uniqKey="Lubroth J" first="Juan" last="Lubroth">Juan Lubroth</name><name sortKey="Morzaria, Subhash" sort="Morzaria, Subhash" uniqKey="Morzaria S" first="Subhash" last="Morzaria">Subhash Morzaria</name><name sortKey="Vondobschuetz, Sophie" sort="Vondobschuetz, Sophie" uniqKey="Vondobschuetz S" first="Sophie" last="Vondobschuetz">Sophie Vondobschuetz</name></country><country name="États-Unis"><region name="État de New York"><name sortKey="Daszak, Peter" sort="Daszak, Peter" uniqKey="Daszak P" first="Peter" last="Daszak">Peter Daszak</name></region><name sortKey="Miller, Maureen" sort="Miller, Maureen" uniqKey="Miller M" first="Maureen" last="Miller">Maureen Miller</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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